Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015980.1 Corchorus olitorius cultivar O-4 contig16013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13385

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
851--911
32
1.9
32
93
0
104
47
6
19
26
1.74
2742--3209
235
2.0
234
93
2
805
31
9
15
42
1.80
8644--8710
20
3.3
20
69
10
64
32
8
25
32
1.87
8683--8749
32
2.1
31
94
2
116
29
8
25
35
1.86
9778--9805
13
2.2
13
100
0
56
25
0
21
53
1.46
10078--10223
36
4.1
36
97
0
265
32
5
24
37
1.78
11865--13379
333
4.5
335
86
3
1970
35
16
13
34
1.88
11865--13379
665
2.3
665
86
4
2075
35
16
13
34
1.88

Tables:   1

The End!