Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015991.1 Corchorus olitorius cultivar O-4 contig16024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39748

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5771--5938
42
4.0
42
98
0
320
48
19
22
10
1.78
6515--6555
17
2.4
17
91
0
64
14
24
36
24
1.93
16767--16798
16
2.0
16
100
0
64
43
18
25
12
1.85
18924--18958
11
3.2
11
91
0
61
80
17
2
0
0.84
19152--19183
2
17.0
2
87
12
50
50
0
0
50
1.00
27646--27962
81
3.9
81
95
1
573
34
13
37
14
1.86
36136--36176
21
1.9
21
85
5
55
34
7
36
21
1.82
39480--39554
22
3.4
21
75
10
69
37
0
4
58
1.17

Tables:   1

The End!