Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015995.1 Corchorus olitorius cultivar O-4 contig16028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27550

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2573--2609
18
2.1
18
90
10
58
48
5
8
37
1.56
3447--3500
19
2.6
21
77
19
60
38
3
18
38
1.69
24251--24314
32
2.0
32
93
0
110
32
17
18
31
1.94
24275--24354
40
2.0
40
85
9
110
33
21
16
28
1.95
25087--25153
15
4.7
15
76
10
77
34
5
29
29
1.81
25098--25149
27
1.9
27
100
0
104
30
3
30
34
1.76
26197--26319
33
3.7
33
82
6
142
42
13
30
13
1.83
27011--27162
32
4.8
32
86
3
198
31
21
20
26
1.98
27011--27162
64
2.4
64
88
2
225
31
21
20
26
1.98

Tables:   1

The End!