Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015998.1 Corchorus olitorius cultivar O-4 contig16031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3371

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1121--1195
24
3.1
24
100
0
150
50
13
16
20
1.77
1378--1496
7
17.0
7
97
0
193
18
0
24
57
1.41
1635--1712
33
2.4
33
91
0
120
32
6
17
43
1.75
1750--2020
54
5.0
54
79
8
139
33
20
17
28
1.96
1816--2072
54
4.8
54
85
3
331
36
21
15
26
1.93
1780--2072
162
1.8
162
81
10
366
34
21
16
26
1.95
2132--2428
37
8.0
37
82
5
332
42
16
17
23
1.89

Tables:   1

The End!