Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016003.1 Corchorus olitorius cultivar O-4 contig16036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20124

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2816--2874
27
2.2
26
82
5
73
44
32
10
13
1.77
2825--2877
27
2.0
27
92
0
88
43
32
11
13
1.79
5464--5659
106
1.8
107
88
2
304
21
15
17
44
1.86
10678--10711
6
5.3
6
89
10
50
0
5
14
79
0.91
10678--10711
13
2.7
12
86
13
50
0
5
14
79
0.91
12702--12757
24
2.3
24
84
3
67
71
5
7
16
1.27
18941--18965
12
2.1
12
100
0
50
44
24
16
16
1.86

Tables:   1

The End!