Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016022.1 Corchorus olitorius cultivar O-4 contig16055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10451

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
249--288
15
2.6
16
88
4
55
15
10
12
62
1.54
2385--2486
49
2.1
48
98
0
177
24
12
11
50
1.73
4234--4276
22
2.0
22
90
0
68
20
23
32
23
1.98
4258--4376
50
2.4
48
87
8
166
18
22
24
34
1.96
6451--6588
33
4.2
32
80
5
116
43
20
7
28
1.80

Tables:   1

The End!