Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016037.1 Corchorus olitorius cultivar O-4 contig16070, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10897

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4531--4681
77
2.0
74
84
6
196
35
11
20
32
1.88
5485--5522
10
3.9
10
82
3
51
86
13
0
0
0.56
5485--5518
12
2.9
11
87
12
50
88
11
0
0
0.52
5486--5518
17
1.9
17
93
0
57
87
12
0
0
0.53
6115--6268
50
3.1
50
83
3
193
29
17
14
38
1.89
7170--7431
137
1.9
137
92
0
443
27
28
15
29
1.96
7166--7431
69
3.9
69
94
1
444
26
28
16
28
1.97
7801--7885
38
2.2
38
78
2
89
24
15
16
43
1.86

Tables:   1

The End!