Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016039.1 Corchorus olitorius cultivar O-4 contig16072, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6176

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1295--1401
42
2.5
42
78
3
108
41
16
15
26
1.89
1420--1527
42
2.6
42
82
2
119
40
13
17
27
1.88
1302--1519
118
1.8
117
82
3
276
39
17
17
24
1.91
1752--1825
30
2.5
30
86
8
98
31
28
25
14
1.95
2541--2597
30
1.9
30
82
7
71
42
22
15
19
1.89

Tables:   1

The End!