Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016051.1 Corchorus olitorius cultivar O-4 contig16084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41658

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6568--6720
76
2.0
76
79
2
164
15
30
27
26
1.96
14450--14692
127
1.9
127
79
3
274
44
16
13
25
1.84
24873--25074
30
6.9
30
85
4
263
36
23
20
19
1.95
24873--25074
58
3.5
60
83
5
263
36
23
20
19
1.95
24863--25071
88
2.4
88
99
0
409
35
24
19
19
1.95
30818--30888
27
2.6
27
90
0
106
39
23
18
18
1.92
40471--40972
253
2.0
253
95
0
914
26
20
17
35
1.95

Tables:   1

The End!