Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016067.1 Corchorus olitorius cultivar O-4 contig16100, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8639

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
919--977
27
2.2
27
80
19
70
42
6
5
45
1.52
2688--2759
35
2.1
35
84
5
92
31
1
30
36
1.66
3461--3617
22
7.2
21
75
13
124
38
8
14
38
1.75
3490--3617
44
2.9
44
82
4
143
37
7
12
42
1.72
3515--3617
43
2.4
44
85
4
129
37
8
11
41
1.73
3774--3867
48
2.0
47
91
2
152
43
8
0
47
1.33
3863--4038
88
2.0
89
92
1
291
32
13
8
45
1.73
6363--6417
2
27.5
2
84
0
74
45
1
5
47
1.36

Tables:   1

The End!