Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016082.1 Corchorus olitorius cultivar O-4 contig16115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36606

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--52
1
46.0
1
91
0
74
95
0
2
2
0.30
1--52
10
5.3
10
90
9
65
92
0
3
3
0.47
32499--32591
46
2.0
46
100
0
186
34
19
8
37
1.82
34768--34805
20
1.9
20
84
10
51
31
2
10
55
1.48
35437--35678
121
2.0
120
98
0
466
35
11
19
33
1.88
35723--35968
122
2.0
122
98
0
474
37
16
19
26
1.92
35979--36015
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!