Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016084.1 Corchorus olitorius cultivar O-4 contig16117, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11211

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5962--6279
170
1.9
163
86
6
455
29
15
13
42
1.84
6161--6186
8
3.2
8
100
0
52
11
0
0
88
0.52
6377--6401
4
6.2
4
100
0
50
52
0
24
24
1.48
6399--6437
2
19.5
2
94
0
69
53
0
46
0
1.00
9037--9114
39
2.0
39
97
0
147
25
19
12
42
1.87
11179--11211
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!