Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016089.1 Corchorus olitorius cultivar O-4 contig16122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14948

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2545--2579
18
1.9
18
88
11
54
25
2
0
71
1.00
4282--4325
20
2.2
20
88
8
63
20
0
15
63
1.31
7798--7827
15
2.0
15
93
0
51
23
13
10
53
1.69
11494--11608
58
2.0
58
86
6
162
32
13
20
33
1.92
13746--13781
2
18.0
2
88
0
54
44
5
0
50
1.25
13969--14015
25
1.9
24
91
4
76
57
8
4
29
1.48

Tables:   1

The End!