Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016090.1 Corchorus olitorius cultivar O-4 contig16123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5221

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1129--1198
36
1.9
36
88
5
106
22
10
8
58
1.57
2721--2784
17
3.2
20
66
20
53
37
1
9
51
1.44
4836--4869
15
2.3
15
100
0
68
41
17
0
41
1.50
5085--5165
39
2.0
40
90
2
128
51
7
3
37
1.48
5156--5202
25
1.9
24
91
4
76
29
4
8
57
1.48

Tables:   1

The End!