Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016092.1 Corchorus olitorius cultivar O-4 contig16125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29205

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
853--922
36
1.9
36
91
0
113
60
8
10
21
1.55
2193--2301
56
1.9
57
84
5
148
34
17
15
32
1.91
3680--3723
22
2.0
21
82
4
52
47
6
6
38
1.57
11577--11611
14
2.4
14
85
4
52
68
8
22
0
1.16
14197--14357
42
4.0
42
74
16
187
29
24
13
32
1.93
14222--14448
77
3.0
77
89
6
333
27
22
16
33
1.95
14244--14465
72
3.0
72
89
5
304
26
22
17
33
1.96
21483--21739
138
1.9
135
86
4
372
49
8
10
31
1.67
28483--28511
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!