Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016094.1 Corchorus olitorius cultivar O-4 contig16127, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45083

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4103--4183
42
1.9
42
94
0
144
46
14
7
30
1.72
4250--4363
56
2.0
56
96
0
210
40
1
23
34
1.65
23211--23305
49
1.9
49
97
0
181
48
9
21
21
1.78
24816--25339
287
1.8
285
90
2
836
39
15
15
28
1.88
26726--26785
29
2.1
29
90
0
93
41
10
16
31
1.81
26491--26989
260
1.9
260
97
0
953
43
16
15
24
1.86
27980--28035
27
2.0
28
89
3
87
30
10
10
48
1.72
42392--42418
4
6.8
4
100
0
54
77
0
0
22
0.76
44946--45015
33
2.1
33
86
5
97
11
35
40
12
1.80

Tables:   1

The End!