Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016100.1 Corchorus olitorius cultivar O-4 contig16133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5369

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
379--459
39
2.0
40
92
2
137
50
8
3
37
1.51
571--967
202
2.0
194
92
5
667
36
11
8
44
1.71
1479--1548
36
1.9
36
91
0
113
60
10
10
20
1.57
4337--4369
16
2.1
16
100
0
66
36
0
12
51
1.39
4386--4437
25
2.1
25
100
0
104
30
7
13
48
1.71

Tables:   1

The End!