Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016103.1 Corchorus olitorius cultivar O-4 contig16136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25928

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--258
84
1.9
84
94
0
284
28
18
22
30
1.98
15659--15865
7
29.9
7
96
1
382
57
0
14
27
1.42
16639--16676
20
1.9
20
100
0
76
21
21
15
42
1.89
17046--17612
145
3.9
145
83
5
712
29
19
15
34
1.93
17687--18190
198
2.5
196
83
6
609
30
19
10
39
1.85
17687--18229
40
13.6
40
89
2
576
29
19
10
39
1.86
22220--22252
13
2.5
13
90
0
57
6
6
12
75
1.16
24158--24193
13
2.7
13
91
4
54
77
5
5
11
1.10

Tables:   1

The End!