Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016115.1 Corchorus olitorius cultivar O-4 contig16148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17434

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5784--5862
37
2.1
37
92
0
131
55
25
10
8
1.62
10243--10274
6
5.3
6
92
0
55
50
31
3
15
1.60
10304--10451
38
3.9
38
92
1
235
22
35
18
23
1.96
10304--10451
77
1.9
75
90
2
233
22
35
18
23
1.96
13509--13557
25
2.0
25
91
0
80
34
16
32
16
1.91
14086--14162
31
2.6
30
82
12
79
35
16
25
22
1.95

Tables:   1

The End!