Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016116.1 Corchorus olitorius cultivar O-4 contig16149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15654

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1778--1816
14
2.9
14
84
3
53
71
0
15
12
1.14
13914--14025
38
2.9
38
86
5
138
27
17
17
36
1.93
14024--14173
39
3.9
39
86
1
194
24
20
17
38
1.93
14177--14669
39
12.9
38
70
10
245
24
19
17
38
1.93
14498--14666
77
2.2
77
80
2
196
24
17
18
38
1.93
14656--14708
25
2.1
25
89
0
79
13
15
20
50
1.76
14627--14747
64
1.9
64
84
3
163
21
16
16
45
1.85
14681--14785
39
2.7
38
80
10
115
21
13
20
44
1.85
14828--14893
34
1.9
34
90
0
105
19
16
21
42
1.89

Tables:   1

The End!