Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016117.1 Corchorus olitorius cultivar O-4 contig16150, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26290

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
564--602
14
2.9
14
84
3
53
71
0
15
12
1.14
5203--5374
86
2.0
86
98
0
335
19
10
25
45
1.82
7636--7689
24
2.2
24
81
12
74
16
31
38
12
1.87
16258--16291
16
2.1
16
100
0
68
26
8
17
47
1.77
24378--24439
24
2.7
24
77
5
65
40
16
6
37
1.74
24440--24531
44
2.1
44
83
4
114
39
13
9
38
1.77
24831--24925
46
2.1
45
82
2
109
29
23
10
36
1.88
25977--26024
19
2.6
20
81
15
59
79
2
12
6
1.01

Tables:   1

The End!