Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016126.1 Corchorus olitorius cultivar O-4 contig16159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16049

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7093--7166
32
2.2
34
85
4
98
20
27
4
48
1.67
7206--7245
20
2.0
20
100
0
80
20
25
30
25
1.99
7255--7315
29
2.1
29
90
0
95
31
21
16
31
1.95
8414--8443
2
15.0
2
100
0
60
50
0
0
50
1.00
8667--8736
35
2.0
35
88
0
104
35
15
21
27
1.94
12612--12650
19
2.1
19
95
0
69
61
20
0
17
1.34
13772--13798
2
13.5
2
100
0
54
51
0
0
48
1.00
15115--15156
22
1.9
22
100
0
84
42
26
7
23
1.80

Tables:   1

The End!