Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016130.1 Corchorus olitorius cultivar O-4 contig16163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4508

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1300--1355
24
2.3
24
84
0
67
41
10
21
26
1.86
1351--2307
36
26.9
35
75
8
768
39
23
18
18
1.92
1351--2306
71
13.4
69
78
8
744
39
23
18
18
1.92
3253--3320
35
1.9
35
88
5
102
11
16
0
72
1.13
3274--3322
22
2.2
24
89
10
77
10
12
0
77
0.99
3269--3319
13
4.2
13
74
25
58
11
13
0
74
1.07
3658--3693
7
5.3
7
86
6
56
0
11
2
86
0.68
4460--4490
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!