Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016132.1 Corchorus olitorius cultivar O-4 contig16165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35060

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
299--418
33
3.6
33
74
0
105
13
34
36
15
1.87
6001--6090
45
2.0
45
95
0
162
13
51
8
26
1.70
6666--6704
19
2.1
19
95
0
69
33
0
30
35
1.58
7251--7302
26
2.0
26
89
10
81
40
0
0
59
0.97
7258--7309
26
2.1
25
82
13
63
44
0
0
55
0.99
8101--8138
11
3.5
11
89
10
51
39
0
2
57
1.12
15842--15921
41
2.0
40
90
2
124
26
12
16
45
1.83
18624--18657
17
1.9
18
88
5
52
23
17
0
58
1.38
19418--19483
19
3.3
19
65
19
53
51
10
9
28
1.67
19406--19490
41
2.1
41
97
0
161
49
9
11
29
1.71
31585--31646
30
2.1
29
87
3
88
46
17
8
27
1.76

Tables:   1

The End!