Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016134.1 Corchorus olitorius cultivar O-4 contig16167, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34379

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2982--3052
33
2.2
33
97
0
133
19
42
29
8
1.81
3188--3237
21
2.4
21
86
0
64
16
46
24
14
1.83
8478--8514
17
2.2
17
95
0
65
51
18
13
16
1.76
16385--16442
30
1.9
30
82
6
73
31
17
6
44
1.75
17547--17583
17
2.2
17
100
0
74
48
16
18
16
1.81
18380--18416
17
2.2
17
95
0
65
48
16
16
18
1.81
17056--18719
833
2.0
833
97
0
3150
23
21
20
33
1.97
25861--25923
21
3.2
21
65
17
62
31
9
14
44
1.77
25847--25923
38
2.0
38
97
0
145
32
10
11
45
1.75
26604--27288
360
1.9
356
89
1
1048
36
13
19
30
1.91
27179--27645
113
4.0
114
83
5
544
36
13
18
31
1.90
31678--31704
2
13.5
2
100
0
54
48
0
0
51
1.00
33261--33317
26
2.2
24
85
11
78
80
0
15
3
0.84

Tables:   1

The End!