Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016151.1 Corchorus olitorius cultivar O-4 contig16184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6926

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3521--3551
8
3.8
8
95
4
53
77
0
9
12
0.99
3929--3969
21
2.0
20
95
4
73
78
4
7
9
1.10
3961--4010
26
2.0
26
92
4
84
72
12
2
14
1.22
4587--4773
50
3.7
50
87
2
268
34
18
14
32
1.91
5375--6118
50
14.8
50
94
1
1213
31
28
12
27
1.93
6443--6635
29
6.8
28
81
7
219
18
17
23
40
1.90

Tables:   1

The End!