Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016152.1 Corchorus olitorius cultivar O-4 contig16185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8663

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2499--2592
45
2.2
43
88
7
138
39
22
4
34
1.74
3853--3897
2
22.5
2
100
0
90
51
0
0
48
1.00
3949--3985
19
1.9
19
89
10
58
70
0
2
27
1.01
4181--4213
2
16.0
2
93
6
57
48
3
0
48
1.17
6688--6738
26
2.0
25
88
3
75
50
1
3
43
1.31
7547--7585
16
2.4
16
86
0
51
2
17
43
35
1.63
7574--7617
12
3.7
12
81
0
52
2
18
52
27
1.57
8060--8112
2
28.0
2
79
11
58
47
0
3
49
1.19

Tables:   1

The End!