Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016157.1 Corchorus olitorius cultivar O-4 contig16190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11167

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2107--2150
16
2.9
15
86
6
54
9
18
0
72
1.10
2132--2240
39
2.9
38
75
20
111
1
19
0
77
0.91
2143--2248
34
3.2
33
84
9
117
1
20
0
76
0.94
2118--2200
7
11.9
7
75
20
50
4
14
1
79
0.95
2123--2241
11
10.9
11
75
13
95
2
19
0
77
0.94
2130--2241
6
20.8
5
73
19
68
1
19
0
77
0.91
2302--2371
36
1.9
37
85
8
99
12
42
38
5
1.67
3934--3986
26
2.1
24
83
13
63
39
16
11
32
1.85
5482--5514
5
6.4
5
96
3
57
0
18
0
81
0.68
6608--6683
38
2.0
38
89
5
118
35
10
17
36
1.84
10370--10405
5
7.6
5
87
12
58
22
19
0
58
1.40
10370--10412
13
3.1
14
87
12
63
23
18
0
58
1.40

Tables:   1

The End!