Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016158.1 Corchorus olitorius cultivar O-4 contig16191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12430

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3457--3572
58
2.0
58
100
0
232
36
13
13
36
1.85
3585--3649
32
2.0
33
93
3
114
32
4
18
44
1.70
4176--4273
49
2.0
49
95
0
178
21
17
14
46
1.83
6640--7188
22
24.6
22
64
19
126
36
9
16
37
1.81
6597--6717
44
2.7
43
79
3
116
40
13
12
33
1.82
6640--7183
44
12.2
44
67
15
149
36
9
16
37
1.82
7059--7183
66
1.9
66
84
0
169
37
9
14
38
1.79
9593--9668
21
3.5
21
75
12
73
44
7
15
31
1.75
9691--9766
22
3.5
22
78
10
75
40
9
11
38
1.74
9826--9885
29
2.1
29
100
0
120
31
6
13
48
1.68
10502--10549
23
2.1
23
96
0
87
41
12
20
25
1.87

Tables:   1

The End!