Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016177.1 Corchorus olitorius cultivar O-4 contig16210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8395

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--345
154
2.0
154
97
0
586
28
27
8
36
1.86
437--500
32
2.0
32
96
0
119
40
17
12
29
1.86
2732--2807
38
1.9
40
86
7
111
40
6
1
51
1.36
2980--3107
43
3.0
43
94
4
233
33
13
9
43
1.76
2980--3102
41
3.0
41
96
2
219
34
13
9
43
1.76
4409--4439
15
2.1
15
100
0
62
25
12
19
41
1.87
6546--6587
16
2.6
16
100
0
84
52
16
7
23
1.68

Tables:   1

The End!