Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016178.1 Corchorus olitorius cultivar O-4 contig16211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20599

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2828--2860
6
5.7
6
89
7
50
84
12
3
0
0.72
2828--2860
11
2.8
12
86
9
50
84
12
3
0
0.72
2828--2860
17
1.9
17
93
0
57
84
12
3
0
0.72
11964--12017
25
2.2
25
96
0
99
42
3
12
40
1.61
12174--12449
107
2.7
100
90
7
425
25
10
25
39
1.86
12994--13033
21
1.9
21
84
0
53
42
5
2
50
1.37

Tables:   1

The End!