Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016182.1 Corchorus olitorius cultivar O-4 contig16215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14517

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3643--3683
20
2.0
20
95
0
73
14
26
14
43
1.84
4955--4991
2
18.5
2
100
0
74
51
0
0
48
1.00
9441--9468
14
2.0
14
100
0
56
7
21
7
64
1.43
14291--14330
21
2.1
19
86
13
55
20
27
15
37
1.92

Tables:   1

The End!