Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016183.1 Corchorus olitorius cultivar O-4 contig16216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53124

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--71
27
2.0
27
85
7
74
70
5
14
9
1.30
36--78
17
2.5
17
71
14
52
76
0
11
11
1.02
41--85
17
2.9
15
87
9
56
77
0
11
11
0.99
5444--5481
19
2.0
19
89
0
58
39
15
21
23
1.92
23916--23941
13
2.0
13
100
0
52
23
23
0
53
1.46
38512--38625
57
2.0
57
89
0
156
27
25
11
35
1.90
49647--50106
228
2.0
228
96
0
850
36
11
3
47
1.59
51783--51831
26
1.9
26
84
12
66
40
6
2
51
1.38

Tables:   1

The End!