Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016185.1 Corchorus olitorius cultivar O-4 contig16218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6850

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3493--3658
84
2.0
85
93
1
289
34
14
15
36
1.87
3637--3692
29
2.0
28
89
3
85
33
3
26
35
1.74
3936--3961
13
2.0
13
100
0
52
46
15
0
38
1.46
4633--4889
133
1.9
133
81
4
304
26
11
19
42
1.85
4978--5155
56
3.3
55
70
18
147
25
7
23
42
1.81
4833--5075
90
2.7
90
79
10
246
23
11
23
42
1.85
6151--6185
2
17.5
2
100
0
70
48
0
0
51
1.00
5625--6392
386
2.0
378
96
2
1428
36
11
9
41
1.75

Tables:   1

The End!