Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016187.1 Corchorus olitorius cultivar O-4 contig16220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20991

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6208--6345
70
2.0
71
92
1
233
37
10
23
27
1.88
16330--16380
19
2.5
20
84
6
59
33
17
13
35
1.89
19479--19603
31
4.0
31
85
0
151
18
21
24
35
1.96
19442--19603
62
2.6
62
80
1
175
19
21
24
34
1.96
20722--20749
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!