Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016194.1 Corchorus olitorius cultivar O-4 contig16227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11467

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6003--6039
19
2.0
19
89
5
58
43
8
21
27
1.80
7536--8382
327
2.6
318
86
4
1185
35
17
14
33
1.89
8486--8529
16
2.8
16
89
0
61
34
38
20
6
1.79
8996--9067
31
2.3
31
75
17
78
26
4
8
61
1.43
9321--9367
13
3.8
12
78
13
51
40
0
4
55
1.19
9535--9607
16
4.6
16
78
10
78
39
39
16
4
1.68
9535--9607
32
2.3
32
83
4
94
39
39
16
4
1.68
9635--10994
321
4.2
321
86
4
1932
34
17
15
32
1.91
10723--11286
288
2.0
289
90
3
895
35
17
14
32
1.90

Tables:   1

The End!