Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001620.1 Corchorus olitorius cultivar O-4 contig01620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15122

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7394--7747
191
1.9
186
84
4
476
28
15
12
44
1.82
11453--11735
41
6.8
41
73
13
193
21
11
28
38
1.89
11497--11737
41
5.7
43
75
8
224
21
10
28
38
1.87
11476--11737
84
3.1
83
83
9
332
22
10
29
38
1.87
13718--13745
12
2.3
12
100
0
56
82
0
0
17
0.68
14537--14561
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!