Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016200.1 Corchorus olitorius cultivar O-4 contig16233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16553

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2886--2982
45
2.2
45
86
1
133
39
20
5
35
1.75
10739--13079
331
7.1
329
79
6
2282
33
14
15
36
1.88
10730--13085
332
7.2
327
79
7
1981
33
14
15
36
1.88
12859--13284
229
1.9
225
84
4
568
36
13
12
37
1.83
13095--13769
329
2.1
325
83
5
833
33
14
15
36
1.88
13762--13813
2
26.0
2
88
0
77
46
1
0
51
1.12
13807--14563
332
2.3
329
83
5
923
33
13
14
38
1.85
16304--16330
14
1.9
14
100
0
54
66
0
3
29
1.09
16271--16327
18
3.2
17
78
11
62
68
0
1
29
1.00
16368--16404
16
2.4
16
86
4
58
64
0
5
29
1.15

Tables:   1

The End!