Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001622.1 Corchorus olitorius cultivar O-4 contig01622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14831

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1110--1160
25
2.0
25
96
0
93
47
9
15
27
1.77
1337--1365
14
2.1
14
100
0
58
51
13
6
27
1.66
2534--2565
2
16.0
2
100
0
64
50
0
0
50
1.00
4055--4092
18
2.1
18
100
0
76
23
5
5
65
1.34
5665--5694
14
2.2
14
94
5
53
0
10
0
90
0.47
11051--11100
21
2.4
21
96
0
91
28
12
18
42
1.85

Tables:   1

The End!