Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016225.1 Corchorus olitorius cultivar O-4 contig16258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25491

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
616--646
6
5.0
6
96
4
53
19
0
0
80
0.71
18741--18838
50
1.9
51
80
13
114
20
5
12
62
1.48
18791--18900
40
2.9
36
75
15
123
22
6
11
59
1.55
21642--21764
61
2.0
61
96
0
228
45
8
26
18
1.79
22847--22879
1
33.0
1
100
0
66
0
0
0
100
0.00
23813--23869
25
2.4
24
85
5
71
57
3
5
33
1.38
24835--24895
32
1.9
32
96
0
113
55
4
13
26
1.57

Tables:   1

The End!