Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016226.1 Corchorus olitorius cultivar O-4 contig16259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12635

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
580--636
25
2.4
24
88
5
80
59
3
5
31
1.36
765--802
16
2.4
16
82
4
51
44
26
15
13
1.83
760--802
15
2.8
15
78
3
50
41
30
16
11
1.83
1396--1429
15
2.3
15
90
5
52
64
0
11
23
1.26
1828--1857
2
15.0
2
100
0
60
50
0
0
50
1.00
3215--3247
15
2.1
17
88
11
52
9
15
36
39
1.79
7785--8013
119
1.9
119
84
3
309
37
17
10
33
1.85
8797--9811
505
2.0
505
99
0
2021
28
18
18
34
1.95
11849--11884
17
2.1
17
89
0
54
38
19
11
30
1.86

Tables:   1

The End!