Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016236.1 Corchorus olitorius cultivar O-4 contig16269, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26224

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1848--1980
63
2.1
64
95
2
243
30
32
12
25
1.92
9117--9177
22
3.0
20
81
11
70
1
13
29
55
1.47
9117--9154
20
1.9
19
89
5
58
2
13
26
57
1.49
9754--9811
27
2.1
27
87
6
82
60
5
13
20
1.53
10086--10117
2
16.0
2
100
0
64
50
0
0
50
1.00
12124--12369
117
2.0
126
86
10
357
36
11
2
50
1.51
12408--12572
82
2.0
83
92
3
280
41
9
1
47
1.47
15004--15069
10
6.5
10
75
8
62
9
0
75
15
1.03
15003--15069
20
3.3
20
85
6
82
8
0
74
16
1.05
25854--25888
17
2.1
17
88
0
52
54
2
5
37
1.39

Tables:   1

The End!