Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016237.1 Corchorus olitorius cultivar O-4 contig16270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25414

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301--342
19
2.2
19
83
8
50
28
2
26
42
1.67
757--781
6
4.2
6
100
0
50
32
32
16
20
1.94
4018--4042
8
3.1
8
100
0
50
76
0
0
24
0.80
4051--4091
7
5.9
7
91
0
64
26
29
2
41
1.69
7628--7654
6
4.5
6
100
0
54
14
0
0
85
0.61
12016--12045
2
15.0
2
100
0
60
50
0
0
50
1.00
16683--16779
41
2.3
41
83
3
122
23
23
24
27
2.00
16877--16911
17
2.1
17
100
0
70
17
28
25
28
1.97
24110--24271
75
2.2
75
90
0
252
19
14
35
31
1.91

Tables:   1

The End!