Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016239.1 Corchorus olitorius cultivar O-4 contig16272, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15289

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
829--897
22
3.2
22
74
12
70
34
10
14
40
1.80
853--893
21
2.0
21
85
9
57
36
12
14
36
1.84
886--941
22
2.5
22
78
16
62
51
7
3
37
1.47
886--1012
44
2.9
44
77
4
114
44
7
10
37
1.68
930--1055
22
5.5
22
70
12
78
38
7
16
37
1.78
1177--1423
22
11.3
22
72
8
146
32
11
17
39
1.85
1255--1423
66
2.6
66
81
3
180
33
11
17
37
1.86
3678--3715
18
2.1
19
85
14
53
31
10
2
55
1.48
12530--12576
23
2.0
24
88
12
71
4
21
10
63
1.43

Tables:   1

The End!