Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016241.1 Corchorus olitorius cultivar O-4 contig16274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17324

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--567
203
2.8
199
89
2
816
33
13
19
33
1.91
576--606
16
1.9
16
93
0
53
45
6
9
38
1.63
620--661
20
2.0
21
86
4
59
47
2
14
35
1.57
2175--2217
20
2.2
20
100
0
86
48
13
4
32
1.63
6995--7110
27
4.3
27
91
0
178
14
21
27
36
1.93
16724--16763
2
20.5
2
94
5
73
50
0
0
50
1.00

Tables:   1

The End!