Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016243.1 Corchorus olitorius cultivar O-4 contig16276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62246

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7848--7966
61
2.0
61
94
0
211
25
10
21
42
1.86
10396--10437
17
2.3
19
80
19
54
61
26
0
11
1.30
14846--14925
39
2.1
39
100
0
160
17
36
15
31
1.91
14960--14993
15
2.3
15
94
0
59
20
14
20
44
1.87
20274--20361
44
2.0
44
97
0
167
47
14
4
32
1.65
22362--22418
29
2.0
29
100
0
114
45
7
29
17
1.75
33878--33914
16
2.3
16
95
0
65
51
5
2
40
1.39
34905--35074
82
2.0
82
84
4
214
50
2
9
37
1.50
38195--38230
12
3.0
12
91
0
54
41
33
8
16
1.78
45132--45186
27
2.0
27
85
3
74
40
9
9
41
1.68
47988--48024
18
2.1
17
90
5
56
29
27
18
24
1.98
55403--55466
18
3.6
18
86
0
83
21
34
31
12
1.91
55403--55466
9
7.1
9
78
0
74
21
34
31
12
1.91

Tables:   1

The End!