Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016246.1 Corchorus olitorius cultivar O-4 contig16279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55198

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3851--3955
48
2.2
49
83
8
137
56
7
14
21
1.63
5207--5235
9
3.3
9
95
4
51
34
20
0
44
1.52
8154--8192
20
1.9
21
84
5
53
25
7
33
33
1.84
9497--9610
56
2.0
56
94
0
201
40
2
23
33
1.69
10979--11004
13
2.0
13
100
0
52
53
30
0
15
1.42
12532--12582
22
2.3
22
83
6
59
41
9
9
39
1.71
42392--42444
23
2.3
23
75
18
56
32
3
13
50
1.59
48711--48776
30
2.2
31
97
2
125
25
1
31
40
1.65
50223--50268
21
2.2
21
96
0
83
58
19
0
21
1.39

Tables:   1

The End!