Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016248.1 Corchorus olitorius cultivar O-4 contig16281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23329

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2274--2353
36
2.2
36
79
0
97
18
38
18
23
1.93
9218--9914
226
3.0
225
86
8
1052
27
23
18
29
1.98
9435--9928
244
2.0
244
94
0
862
27
23
19
29
1.98
19821--19863
3
14.3
3
100
0
86
0
32
0
67
0.91
22881--22950
34
2.2
31
82
12
81
21
21
27
30
1.98
23154--23208
27
2.0
27
100
0
110
18
34
21
25
1.96

Tables:   1

The End!