Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016258.1 Corchorus olitorius cultivar O-4 contig16291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8099

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1192--1216
11
2.3
11
100
0
50
44
20
0
36
1.52
4887--4915
14
2.1
14
100
0
58
51
13
6
27
1.66
7017--7075
28
2.1
28
93
6
102
42
5
10
42
1.60
7354--7532
89
2.0
89
100
0
358
30
26
18
24
1.98

Tables:   1

The End!