Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016259.1 Corchorus olitorius cultivar O-4 contig16292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10998

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417--1164
32
23.6
32
83
9
901
20
26
15
37
1.93
417--1164
33
23.6
32
80
11
715
20
26
15
37
1.93
417--1164
65
11.8
64
83
9
887
20
26
15
37
1.93
1143--1195
25
2.1
25
96
0
97
15
24
18
41
1.89
3160--3204
23
2.0
23
95
0
81
44
8
6
40
1.62
9681--9720
21
2.0
20
85
5
53
42
22
17
17
1.89
10064--10139
36
2.1
36
85
4
100
32
22
14
30
1.94
10258--10384
37
3.4
37
91
4
202
37
24
7
30
1.84
10279--10418
24
5.7
24
73
15
92
31
25
9
34
1.87
10367--10422
26
2.2
26
83
6
69
28
25
8
37
1.86

Tables:   1

The End!